Gep Pathways Annotation Project Details

This video is intended to help you fill out the

This version of the

We mapped each CDS separately to determine their approximate locations in the previous video of this series. Throughout Part 6 ...

The

This version of the

In this section of the

Now that we've completed the

In this short video we will perform a tblastn search of Rheb-PA in D. melanogaster against the entire D. yakuba genome assembly.

In the previous video of this series, we performed a tblastn search of Rheb-PA in D. melanogaster against the entire D. yakuba ...

In this video, you will learn how to identify splice sites and determine the phase of donor and acceptor splice sites using the ...

The initial tblastn search we performed in Part 2 helped define the search region for the putative ortholog within the genomic ...

This video goes over how to use RNA-Seq in the UCSC Genome Browser to verify the coordinates of intron 1. Resources:

This version of the

In this video, we verify the coordinates of the second intron in our target gene using the Splice Junctions track and other evidence ...

In this video, we will be determining the function of the suspected ortholog in our target species. By using the GenBank records, ...

In this short video, we demonstrate how to combine (or batch) blastp and tblastn searches in NCBI BLAST (basic local alignment ...

In Part 4 we will use the Gene Record Finder, which is a web tool that enables us to quickly identify the set of exons for a given ...

In this short video, we will examine the genomic neighborhood surrounding the target gene, Rheb, in Drosophila melanogaster.

In the previous videos of this series, we examined the genomic neighborhood of our target gene, Rheb, in D. melanogaster. Now ...